Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 AC007389.4-201ENST00000454674 793 ntBASIC17.92■□□□□ 0.46
COL20A1Q9P218 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 AC000095.1-201ENST00000603208 874 ntBASIC17.92■□□□□ 0.46
COL20A1Q9P218 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.92■□□□□ 0.46
COL20A1Q9P218 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL20A1Q9P218 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.92■□□□□ 0.46
COL20A1Q9P218 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.91■□□□□ 0.46
COL20A1Q9P218 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 CYP2T1P-202ENST00000641596 2535 ntBASIC17.91■□□□□ 0.46
COL20A1Q9P218 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 AC007274.1-201ENST00000439805 662 ntBASIC17.91■□□□□ 0.46
COL20A1Q9P218 VDAC1P7-201ENST00000462417 847 ntBASIC17.91■□□□□ 0.46
COL20A1Q9P218 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 USP32P1-208ENST00000506594 1164 ntBASIC17.91■□□□□ 0.46
COL20A1Q9P218 AC106886.1-201ENST00000568660 600 ntBASIC17.91■□□□□ 0.46
COL20A1Q9P218 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 AL049840.4-201ENST00000602422 811 ntBASIC17.91■□□□□ 0.46
COL20A1Q9P218 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.91■□□□□ 0.46
COL20A1Q9P218 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL20A1Q9P218 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 AC010491.1-201ENST00000563101 2797 ntBASIC17.9■□□□□ 0.46
COL20A1Q9P218 INTS4P2-202ENST00000614726 2019 ntBASIC17.9■□□□□ 0.46
COL20A1Q9P218 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms