Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC007950.2-201ENST00000615045 2347 ntBASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC074338.1-201ENST00000416825 156 ntBASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC023310.3-201ENST00000557027 670 ntBASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC100756.1-201ENST00000562736 682 ntBASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC138749.3-201ENST00000567691 622 ntBASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC116165.1-201ENST00000611806 668 ntBASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.39■□□□□ 0.7
HMG20BQ9P0W2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMG20BQ9P0W2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMG20BQ9P0W2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 DFFBP1-201ENST00000433250 979 ntBASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 AL353779.1-201ENST00000434793 351 ntBASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 AC005225.4-201ENST00000557330 545 ntBASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 TP53TG3HP-202ENST00000569755 579 ntBASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 CHCHD2P3-201ENST00000603038 451 ntBASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 LINC01115-203ENST00000606068 577 ntBASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 REXO1L1P-202ENST00000608646 1974 ntBASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20BQ9P0W2 AC010491.1-201ENST00000563101 2797 ntBASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 TARDBPP1-201ENST00000442013 1203 ntBASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20BQ9P0W2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 SLC7A15P-201ENST00000424028 1363 ntBASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.37■□□□□ 0.69
HMG20BQ9P0W2 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms