Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 TMEM14DP-201ENST00000422205 345 ntBASIC19.11■□□□□ 0.65
SALL1Q9NSC2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 HILS1-202ENST00000545329 423 ntBASIC19.11■□□□□ 0.65
SALL1Q9NSC2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 AC000095.1-201ENST00000603208 874 ntBASIC19.11■□□□□ 0.65
SALL1Q9NSC2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.1■□□□□ 0.65
SALL1Q9NSC2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 ACA64.2-201ENST00000459014 129 ntBASIC19.1■□□□□ 0.65
SALL1Q9NSC2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.1■□□□□ 0.65
SALL1Q9NSC2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SALL1Q9NSC2 AC010491.1-201ENST00000563101 2797 ntBASIC19.1■□□□□ 0.65
SALL1Q9NSC2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 AC112492.5-201ENST00000421897 457 ntBASIC19.09■□□□□ 0.65
SALL1Q9NSC2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 IGHV3-71-201ENST00000523324 359 ntBASIC19.09■□□□□ 0.65
SALL1Q9NSC2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 AC015936.2-201ENST00000593177 259 ntBASIC19.09■□□□□ 0.65
SALL1Q9NSC2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 AL008721.1-201ENST00000609964 604 ntBASIC19.09■□□□□ 0.65
SALL1Q9NSC2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL1Q9NSC2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SALL1Q9NSC2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms