Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 AC006486.2-201ENST00000624246 2199 ntBASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
POLR2J3Q9H1A7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
POLR2J3Q9H1A7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
POLR2J3Q9H1A7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.83□□□□□ -0.03
POLR2J3Q9H1A7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
POLR2J3Q9H1A7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
POLR2J3Q9H1A7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
POLR2J3Q9H1A7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 AC002056.1-201ENST00000395613 760 ntBASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 MRPL3P1-201ENST00000400109 1033 ntBASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 SLC25A6P4-201ENST00000586535 553 ntBASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 AC004877.2-201ENST00000623941 599 ntBASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 BCAR1-209ENST00000546196 1340 ntBASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
POLR2J3Q9H1A7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 LINC02228-204ENST00000642115 2962 ntBASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 AC087481.3-201ENST00000602886 1894 ntBASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 KRT19P2-202ENST00000557173 1012 ntBASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 AC068137.2-201ENST00000605408 478 ntBASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms