Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC3Q9BY71 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRRC3Q9BY71 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 DOC2GP-204ENST00000639052 2548 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 HAUS4P1-201ENST00000406739 1145 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AC136604.1-201ENST00000418535 575 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AL442647.2-201ENST00000429864 857 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 HNRNPUP1-201ENST00000554987 333 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 MIR4259-201ENST00000584466 101 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 BRI3BPP1-201ENST00000594224 787 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AC010319.3-201ENST00000597028 470 ntBASIC16.6■□□□□ 0.25
LRRC3Q9BY71 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC3Q9BY71 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 HLA-V-201ENST00000429037 534 ntBASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 USP32P1-208ENST00000506594 1164 ntBASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AC036164.1-201ENST00000570544 333 ntBASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AC097359.3-201ENST00000603982 1210 ntBASIC16.59■□□□□ 0.25
LRRC3Q9BY71 MIR6805-201ENST00000615055 62 ntBASIC16.59■□□□□ 0.25
LRRC3Q9BY71 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 CROCCP1-201ENST00000426910 5675 ntBASIC16.59■□□□□ 0.25
LRRC3Q9BY71 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC3Q9BY71 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms