Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 AC010491.1-201ENST00000563101 2797 ntBASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAF4Q9BUZ4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 AC091167.2-201ENST00000579581 588 ntBASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 LINC00528-201ENST00000600723 2160 ntBASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAF4Q9BUZ4 CICP24-201ENST00000605464 2705 ntBASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 TOP3BP1-201ENST00000420768 1380 ntBASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 SPCS2P4-201ENST00000436160 681 ntBASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 AC069335.1-201ENST00000489972 472 ntBASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 Z92544.3-201ENST00000624747 417 ntBASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms