Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.25■□□□□ 0.03
CGREF1Q99674 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 AC112693.3-201ENST00000624819 1983 ntBASIC15.25■□□□□ 0.03
CGREF1Q99674 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CGREF1Q99674 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.24■□□□□ 0.03
CGREF1Q99674 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CGREF1Q99674 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.24■□□□□ 0.03
CGREF1Q99674 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CGREF1Q99674 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 IGLL3P-201ENST00000412472 434 ntBASIC15.24■□□□□ 0.03
CGREF1Q99674 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 KRT18P67-201ENST00000432816 1264 ntBASIC15.24■□□□□ 0.03
CGREF1Q99674 VN2R19P-201ENST00000442399 1052 ntBASIC15.24■□□□□ 0.03
CGREF1Q99674 AF186996.4-201ENST00000467186 377 ntBASIC15.24■□□□□ 0.03
CGREF1Q99674 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.24■□□□□ 0.03
CGREF1Q99674 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.24■□□□□ 0.03
CGREF1Q99674 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.24■□□□□ 0.03
CGREF1Q99674 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 AC012313.10-201ENST00000623509 926 ntBASIC15.24■□□□□ 0.03
CGREF1Q99674 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CGREF1Q99674 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CGREF1Q99674 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CGREF1Q99674 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.24■□□□□ 0.03
CGREF1Q99674 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CGREF1Q99674 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.23■□□□□ 0.03
CGREF1Q99674 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 AC092474.2-201ENST00000424288 719 ntBASIC15.23■□□□□ 0.03
CGREF1Q99674 GPX1P2-201ENST00000429271 606 ntBASIC15.23■□□□□ 0.03
CGREF1Q99674 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 FAM215A-202ENST00000632077 792 ntBASIC15.23■□□□□ 0.03
CGREF1Q99674 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 C18orf15-201ENST00000623680 2534 ntBASIC15.23■□□□□ 0.03
CGREF1Q99674 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CGREF1Q99674 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms