Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP2Q96SN8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 BCRP2-202ENST00000447763 634 ntBASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 BCRP6-201ENST00000510112 632 ntBASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 BCRP7-201ENST00000511549 544 ntBASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 AP001889.1-201ENST00000525414 633 ntBASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 AC134312.5-201ENST00000568031 1313 ntBASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP2Q96SN8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 CNN2P10-201ENST00000443067 918 ntBASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 AC133552.6-201ENST00000613406 534 ntBASIC18.46■□□□□ 0.54
CDK5RAP2Q96SN8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 BOLA2P3-201ENST00000404566 256 ntBASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 AL391005.1-201ENST00000623953 2435 ntBASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP2Q96SN8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 AC016694.1-201ENST00000434179 700 ntBASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 EIF3FP3-201ENST00000434851 1086 ntBASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 AP001063.1-201ENST00000568332 529 ntBASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP2Q96SN8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms