Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AL513480.1-201ENST00000451731 511 ntBASIC14.65□□□□□ -0.06
SNX18Q96RF0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 PGAM5P1-201ENST00000518923 814 ntBASIC14.65□□□□□ -0.06
SNX18Q96RF0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AC096734.2-201ENST00000562054 433 ntBASIC14.65□□□□□ -0.06
SNX18Q96RF0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
SNX18Q96RF0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 CDC14C-201ENST00000428251 1719 ntBASIC14.64□□□□□ -0.07
SNX18Q96RF0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 AC069224.1-201ENST00000566372 1715 ntBASIC14.64□□□□□ -0.07
SNX18Q96RF0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 CRYGEP-201ENST00000412192 528 ntBASIC14.64□□□□□ -0.07
SNX18Q96RF0 RHOQP3-201ENST00000437982 621 ntBASIC14.64□□□□□ -0.07
SNX18Q96RF0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 AC009947.1-201ENST00000444350 727 ntBASIC14.64□□□□□ -0.07
SNX18Q96RF0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 HCG4B-203ENST00000450128 991 ntBASIC14.64□□□□□ -0.07
SNX18Q96RF0 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 AC010327.4-202ENST00000591484 748 ntBASIC14.64□□□□□ -0.07
SNX18Q96RF0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SNX18Q96RF0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms