Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 AL162726.2-201ENST00000438986 1017 ntBASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 DOC2GP-204ENST00000639052 2548 ntBASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.08■□□□□ 0.49
SYNGAP1Q96PV0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 CROCCP1-201ENST00000426910 5675 ntBASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNGAP1Q96PV0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 CROCCP4-201ENST00000457096 498 ntBASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AC092658.1-201ENST00000505836 891 ntBASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AC104989.1-201ENST00000519711 778 ntBASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AC233724.13-201ENST00000598383 410 ntBASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNGAP1Q96PV0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 KRT8P22-201ENST00000562317 1415 ntBASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 ANKRD19P-201ENST00000338192 862 ntBASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 AC074338.1-201ENST00000416825 156 ntBASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SYNGAP1Q96PV0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms