Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TIMM17BP1-201ENST00000545713 516 ntBASIC17.19■□□□□ 0.34
SNX27Q96L92 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.19■□□□□ 0.34
SNX27Q96L92 AC097359.3-201ENST00000603982 1210 ntBASIC17.19■□□□□ 0.34
SNX27Q96L92 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.19■□□□□ 0.34
SNX27Q96L92 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SNX27Q96L92 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.18■□□□□ 0.34
SNX27Q96L92 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SNX27Q96L92 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SNX27Q96L92 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 AL596257.1-201ENST00000641463 2694 ntBASIC17.18■□□□□ 0.34
SNX27Q96L92 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 REXO1L6P-201ENST00000603433 1515 ntBASIC17.18■□□□□ 0.34
SNX27Q96L92 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.18■□□□□ 0.34
SNX27Q96L92 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.18■□□□□ 0.34
SNX27Q96L92 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SNX27Q96L92 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SNX27Q96L92 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.18■□□□□ 0.34
SNX27Q96L92 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SNX27Q96L92 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 CHCHD2P3-201ENST00000603038 451 ntBASIC17.18■□□□□ 0.34
SNX27Q96L92 AC099568.2-201ENST00000609194 695 ntBASIC17.18■□□□□ 0.34
SNX27Q96L92 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.18■□□□□ 0.34
SNX27Q96L92 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SNX27Q96L92 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.18■□□□□ 0.34
SNX27Q96L92 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNX27Q96L92 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX27Q96L92 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SNX27Q96L92 AL162727.3-201ENST00000635661 2787 ntBASIC17.17■□□□□ 0.34
SNX27Q96L92 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNX27Q96L92 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.17■□□□□ 0.34
SNX27Q96L92 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SNX27Q96L92 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX27Q96L92 AC087499.6-201ENST00000411576 835 ntBASIC17.17■□□□□ 0.34
SNX27Q96L92 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 MEP1AP4-201ENST00000423244 1087 ntBASIC17.17■□□□□ 0.34
SNX27Q96L92 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.17■□□□□ 0.34
SNX27Q96L92 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.17■□□□□ 0.34
SNX27Q96L92 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX27Q96L92 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX27Q96L92 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX27Q96L92 WASH4P-201ENST00000564273 1246 ntBASIC17.17■□□□□ 0.34
SNX27Q96L92 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX27Q96L92 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms