Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL589702.1-201ENST00000641229 1509 ntBASIC17.21■□□□□ 0.35
LRCH3Q96II8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 AC006001.1-201ENST00000325130 474 ntBASIC17.21■□□□□ 0.35
LRCH3Q96II8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 AC078819.1-201ENST00000547454 765 ntBASIC17.21■□□□□ 0.35
LRCH3Q96II8 AC012085.1-201ENST00000548270 765 ntBASIC17.21■□□□□ 0.35
LRCH3Q96II8 AP001063.1-201ENST00000568332 529 ntBASIC17.21■□□□□ 0.35
LRCH3Q96II8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 MIR6756-201ENST00000616240 63 ntBASIC17.21■□□□□ 0.35
LRCH3Q96II8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH3Q96II8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH3Q96II8 AC015818.8-201ENST00000587907 1519 ntBASIC17.21■□□□□ 0.34
LRCH3Q96II8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.21■□□□□ 0.34
LRCH3Q96II8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRCH3Q96II8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
LRCH3Q96II8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRCH3Q96II8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 AL627389.1-201ENST00000413508 1182 ntBASIC17.2■□□□□ 0.34
LRCH3Q96II8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 AC016700.1-201ENST00000429424 312 ntBASIC17.2■□□□□ 0.34
LRCH3Q96II8 FAM197Y7-201ENST00000432892 766 ntBASIC17.2■□□□□ 0.34
LRCH3Q96II8 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 COX5BP1-201ENST00000507622 393 ntBASIC17.2■□□□□ 0.34
LRCH3Q96II8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 AC120045.2-201ENST00000567334 178 ntBASIC17.2■□□□□ 0.34
LRCH3Q96II8 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 AP003400.6-201ENST00000624698 740 ntBASIC17.2■□□□□ 0.34
LRCH3Q96II8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.2■□□□□ 0.34
LRCH3Q96II8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH3Q96II8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 Z97205.2-201ENST00000564697 1639 ntBASIC17.19■□□□□ 0.34
LRCH3Q96II8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRCH3Q96II8 FO393414.2-201ENST00000405153 598 ntBASIC17.19■□□□□ 0.34
LRCH3Q96II8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LRCH3Q96II8 PGAM1P5-201ENST00000548011 764 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms