Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 INTS4P1-201ENST00000438455 1935 ntBASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 SIGLEC16-201ENST00000599858 1437 ntBASIC16.19■□□□□ 0.18
CHMP6Q96FZ7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 AC092127.1-201ENST00000567093 3455 ntBASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 U82695.1-201ENST00000635752 1889 ntBASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 AC041040.2-201ENST00000622926 2899 ntBASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 POM121L3P-201ENST00000419331 1163 ntBASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 ATP5G2P1-201ENST00000433580 426 ntBASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 AP000867.4-201ENST00000641616 219 ntBASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP6Q96FZ7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 AC011477.6-201ENST00000604980 1927 ntBASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 MYO15B-237ENST00000642007 4893 ntBASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 HCG4P8-203ENST00000443049 980 ntBASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 REXO1L3P-201ENST00000622202 1288 ntBASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP6Q96FZ7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms