Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 AC109635.5-201ENST00000533593 962 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 AL078644.1-201ENST00000609881 752 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 AGAP7P-201ENST00000582299 2062 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 AGAP14-201ENST00000624701 2060 ntBASIC15.26■□□□□ 0.03
LRRC58Q96CX6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRRC58Q96CX6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 PRSS29P-201ENST00000440800 595 ntBASIC15.25■□□□□ 0.03
LRRC58Q96CX6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 AC012640.2-201ENST00000561606 901 ntBASIC15.25■□□□□ 0.03
LRRC58Q96CX6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 PRELID1P1-202ENST00000567272 903 ntBASIC15.25■□□□□ 0.03
LRRC58Q96CX6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 AC002347.1-201ENST00000569543 541 ntBASIC15.25■□□□□ 0.03
LRRC58Q96CX6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 AL009183.1-201ENST00000603760 355 ntBASIC15.25■□□□□ 0.03
LRRC58Q96CX6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 FLJ16779-201ENST00000612722 7638 ntBASIC15.25■□□□□ 0.03
LRRC58Q96CX6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC58Q96CX6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 SNX18-202ENST00000343017 3140 ntBASIC15.24■□□□□ 0.03
LRRC58Q96CX6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 AL450487.1-201ENST00000426799 995 ntBASIC15.24■□□□□ 0.03
LRRC58Q96CX6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC58Q96CX6 KRT8P44-201ENST00000441609 1350 ntBASIC15.24■□□□□ 0.03
LRRC58Q96CX6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRC58Q96CX6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
LRRC58Q96CX6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LRRC58Q96CX6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRC58Q96CX6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC58Q96CX6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC58Q96CX6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms