Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC4Q92889 BCAR1-209ENST00000546196 1340 ntBASIC18.2■□□□□ 0.5
ERCC4Q92889 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC4Q92889 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ERCC4Q92889 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC4Q92889 AL589702.1-201ENST00000641229 1509 ntBASIC18.19■□□□□ 0.5
ERCC4Q92889 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.19■□□□□ 0.5
ERCC4Q92889 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
ERCC4Q92889 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 AC007967.2-201ENST00000432613 625 ntBASIC18.19■□□□□ 0.5
ERCC4Q92889 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.19■□□□□ 0.5
ERCC4Q92889 AC109635.5-201ENST00000533593 962 ntBASIC18.19■□□□□ 0.5
ERCC4Q92889 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC4Q92889 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
ERCC4Q92889 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC4Q92889 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC4Q92889 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC4Q92889 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 AC104109.2-201ENST00000602919 1418 ntBASIC18.18■□□□□ 0.5
ERCC4Q92889 AL365209.1-201ENST00000624418 6473 ntBASIC18.18■□□□□ 0.5
ERCC4Q92889 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC4Q92889 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC4Q92889 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 AC026396.1-201ENST00000419388 421 ntBASIC18.18■□□□□ 0.5
ERCC4Q92889 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC4Q92889 KRT18P34-201ENST00000488218 1270 ntBASIC18.18■□□□□ 0.5
ERCC4Q92889 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.18■□□□□ 0.5
ERCC4Q92889 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
ERCC4Q92889 AC023141.13-201ENST00000604991 943 ntBASIC18.18■□□□□ 0.5
ERCC4Q92889 Z83851.2-201ENST00000609564 659 ntBASIC18.18■□□□□ 0.5
ERCC4Q92889 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ERCC4Q92889 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC4Q92889 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC4Q92889 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC4Q92889 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.18■□□□□ 0.5
ERCC4Q92889 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC4Q92889 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ERCC4Q92889 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ERCC4Q92889 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 AC140658.5-201ENST00000438532 169 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms