Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 AL607033.1-201ENST00000623900 1599 ntBASIC17.15■□□□□ 0.34
SEMA4DQ92854 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.14■□□□□ 0.34
SEMA4DQ92854 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SEMA4DQ92854 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.14■□□□□ 0.34
SEMA4DQ92854 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.14■□□□□ 0.34
SEMA4DQ92854 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 FO393414.2-201ENST00000405153 598 ntBASIC17.14■□□□□ 0.33
SEMA4DQ92854 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.14■□□□□ 0.33
SEMA4DQ92854 AC107890.1-201ENST00000422478 521 ntBASIC17.14■□□□□ 0.33
SEMA4DQ92854 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 HLA-V-204ENST00000476601 1289 ntBASIC17.14■□□□□ 0.33
SEMA4DQ92854 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 AC140878.1-201ENST00000565277 250 ntBASIC17.14■□□□□ 0.33
SEMA4DQ92854 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 TEX28P1-201ENST00000613479 1221 ntBASIC17.14■□□□□ 0.33
SEMA4DQ92854 TEX28P2-201ENST00000617764 1221 ntBASIC17.14■□□□□ 0.33
SEMA4DQ92854 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.14■□□□□ 0.33
SEMA4DQ92854 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEMA4DQ92854 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 AC136604.1-201ENST00000418535 575 ntBASIC17.13■□□□□ 0.33
SEMA4DQ92854 TREML5P-201ENST00000421694 576 ntBASIC17.13■□□□□ 0.33
SEMA4DQ92854 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 AC097493.3-201ENST00000509725 367 ntBASIC17.13■□□□□ 0.33
SEMA4DQ92854 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms