Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
DDX1Q92499 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.99■□□□□ 0.31
DDX1Q92499 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.99■□□□□ 0.31
DDX1Q92499 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.99■□□□□ 0.31
DDX1Q92499 KLF2P3-201ENST00000451977 1087 ntBASIC16.99■□□□□ 0.31
DDX1Q92499 AL512638.1-201ENST00000457493 794 ntBASIC16.99■□□□□ 0.31
DDX1Q92499 MEIS3P1-201ENST00000495167 958 ntBASIC16.99■□□□□ 0.31
DDX1Q92499 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.99■□□□□ 0.31
DDX1Q92499 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.99■□□□□ 0.31
DDX1Q92499 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.99■□□□□ 0.31
DDX1Q92499 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.99■□□□□ 0.31
DDX1Q92499 AC097359.3-201ENST00000603982 1210 ntBASIC16.99■□□□□ 0.31
DDX1Q92499 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 AC009090.5-201ENST00000624886 2285 ntBASIC16.99■□□□□ 0.31
DDX1Q92499 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.99■□□□□ 0.31
DDX1Q92499 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
DDX1Q92499 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
DDX1Q92499 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.98■□□□□ 0.31
DDX1Q92499 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
DDX1Q92499 TUBB3P1-201ENST00000405796 1332 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
DDX1Q92499 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
DDX1Q92499 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
DDX1Q92499 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.98■□□□□ 0.31
DDX1Q92499 SPDYE17-201ENST00000412399 783 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 AC107890.1-201ENST00000422478 521 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 PHKG1P2-201ENST00000457537 863 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 AL450472.2-201ENST00000603663 1156 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 AC007967.4-201ENST00000614700 386 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 AP001059.3-201ENST00000619053 235 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX1Q92499 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
DDX1Q92499 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.98■□□□□ 0.31
DDX1Q92499 AC090616.6-203ENST00000579186 1945 ntBASIC16.98■□□□□ 0.31
DDX1Q92499 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
DDX1Q92499 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.97■□□□□ 0.31
DDX1Q92499 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DDX1Q92499 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 OR6D1P-203ENST00000641209 4860 ntBASIC16.97■□□□□ 0.31
DDX1Q92499 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX1Q92499 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DDX1Q92499 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.97■□□□□ 0.31
DDX1Q92499 AL353705.2-201ENST00000428243 662 ntBASIC16.97■□□□□ 0.31
DDX1Q92499 HIST3H2BA-201ENST00000436555 524 ntBASIC16.97■□□□□ 0.31
DDX1Q92499 CRB3P1-201ENST00000449338 276 ntBASIC16.97■□□□□ 0.31
DDX1Q92499 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX1Q92499 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DDX1Q92499 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.97■□□□□ 0.31
DDX1Q92499 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX1Q92499 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX1Q92499 HNRNPUP1-201ENST00000554987 333 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms