Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 AC004832.2-201ENST00000426397 482 ntBASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 ACTG1P14-201ENST00000446382 1122 ntBASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 RNA5SP410-201ENST00000516285 106 ntBASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 MTDHP5-201ENST00000598980 586 ntBASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 C20orf181-201ENST00000623918 480 ntBASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 MYO15B-237ENST00000642007 4893 ntBASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 PGAM5P1-201ENST00000518923 814 ntBASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AC097376.2-205ENST00000610159 5334 ntBASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.72■□□□□ 0.27
TRAF3IP1Q8TDR0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 OR2I1P-209ENST00000641730 5365 ntBASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms