Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 AC009407.1-201ENST00000568958 598 ntBASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 MIR4706-201ENST00000582134 82 ntBASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 MIR4321-201ENST00000592276 80 ntBASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC17A8Q8NDX2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC17A8Q8NDX2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 MIR648-201ENST00000385046 94 ntBASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 AC234644.1-201ENST00000406065 370 ntBASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 MIR7845-201ENST00000618396 99 ntBASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms