Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
C3orf56Q8N813 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
C3orf56Q8N813 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.52□□□□□ -0.4
C3orf56Q8N813 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.52□□□□□ -0.4
C3orf56Q8N813 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
C3orf56Q8N813 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
C3orf56Q8N813 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 CALR4P-201ENST00000431943 946 ntBASIC12.52□□□□□ -0.41
C3orf56Q8N813 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 RPL13AP25-201ENST00000484130 612 ntBASIC12.52□□□□□ -0.41
C3orf56Q8N813 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 AC009486.1-201ENST00000569860 813 ntBASIC12.52□□□□□ -0.41
C3orf56Q8N813 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 RPSAP52-203ENST00000622976 1023 ntBASIC12.52□□□□□ -0.41
C3orf56Q8N813 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 AC068587.6-202ENST00000641839 5619 ntBASIC12.52□□□□□ -0.41
C3orf56Q8N813 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C3orf56Q8N813 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.52□□□□□ -0.41
C3orf56Q8N813 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC134915.1-201ENST00000426461 574 ntBASIC12.51□□□□□ -0.41
C3orf56Q8N813 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AP001889.1-201ENST00000525414 633 ntBASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC013467.2-201ENST00000605472 835 ntBASIC12.51□□□□□ -0.41
C3orf56Q8N813 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AC244452.3-201ENST00000636814 210 ntBASIC12.51□□□□□ -0.41
C3orf56Q8N813 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C3orf56Q8N813 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.51□□□□□ -0.41
C3orf56Q8N813 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms