Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.21■□□□□ 0.19
SYNPOQ8N3V7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.21■□□□□ 0.18
SYNPOQ8N3V7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SYNPOQ8N3V7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SYNPOQ8N3V7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SYNPOQ8N3V7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 PDIA3P1-201ENST00000471856 1510 ntBASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 AC005229.1-201ENST00000392885 409 ntBASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 MIR5189-201ENST00000577370 114 ntBASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 BRI3BPP1-201ENST00000594224 787 ntBASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 LINC01115-203ENST00000606068 577 ntBASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SYNPOQ8N3V7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 TDH-203ENST00000531764 1110 ntBASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 PTP4A1P2-201ENST00000546033 454 ntBASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 MIR6869-201ENST00000619434 62 ntBASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPOQ8N3V7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPOQ8N3V7 AL355994.2-201ENST00000447882 704 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms