Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TMEFF1Q8IYR6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 CROCCP1-201ENST00000426910 5675 ntBASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AC005229.1-201ENST00000392885 409 ntBASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 RPL7P3-201ENST00000441388 714 ntBASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 RNA5SP412-201ENST00000516234 123 ntBASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AP001889.1-201ENST00000525414 633 ntBASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEFF1Q8IYR6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 SOCS2P1-201ENST00000417727 557 ntBASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 AL355864.2-201ENST00000447420 863 ntBASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 FO681548.1-201ENST00000455617 1132 ntBASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 ENPP7P5-201ENST00000541031 1031 ntBASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 INTS4P2-202ENST00000614726 2019 ntBASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 HLA-A-202ENST00000376806 1854 ntBASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TMEFF1Q8IYR6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms