Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC004877.2-201ENST00000623941 599 ntBASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 PCDHA3-202ENST00000532566 4594 ntBASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 AC092474.2-201ENST00000424288 719 ntBASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 AC007967.2-201ENST00000432613 625 ntBASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 TPM4P1-201ENST00000436100 807 ntBASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 AC140658.5-201ENST00000438532 169 ntBASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 AC073439.1-201ENST00000624121 1774 ntBASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC50Q8IVM0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 CICP13-201ENST00000422015 2789 ntBASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC50Q8IVM0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
CCDC50Q8IVM0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms