Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VRK2Q86Y07 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.82□□□□□ -0.04
VRK2Q86Y07 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 AL513477.1-201ENST00000602865 2407 ntBASIC14.81□□□□□ -0.04
VRK2Q86Y07 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 MIR346-201ENST00000362234 95 ntBASIC14.81□□□□□ -0.04
VRK2Q86Y07 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 AC004832.2-201ENST00000426397 482 ntBASIC14.81□□□□□ -0.04
VRK2Q86Y07 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 ALG1L5P-201ENST00000482043 771 ntBASIC14.81□□□□□ -0.04
VRK2Q86Y07 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 IGHV3-62-201ENST00000520057 340 ntBASIC14.81□□□□□ -0.04
VRK2Q86Y07 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 C20orf181-201ENST00000623918 480 ntBASIC14.81□□□□□ -0.04
VRK2Q86Y07 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.81□□□□□ -0.04
VRK2Q86Y07 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK2Q86Y07 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VRK2Q86Y07 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 AL136982.4-201ENST00000437689 1740 ntBASIC14.8□□□□□ -0.04
VRK2Q86Y07 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 FAM220BP-201ENST00000377689 816 ntBASIC14.8□□□□□ -0.04
VRK2Q86Y07 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 AL671883.3-201ENST00000603274 991 ntBASIC14.8□□□□□ -0.04
VRK2Q86Y07 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 AC103702.1-201ENST00000548801 2630 ntBASIC14.8□□□□□ -0.04
VRK2Q86Y07 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 UXT-AS1-201ENST00000590504 1525 ntBASIC14.8□□□□□ -0.04
VRK2Q86Y07 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK2Q86Y07 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK2Q86Y07 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms