Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 CNN2P8-201ENST00000421872 913 ntBASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 ZNF767P-206ENST00000513792 565 ntBASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AC026410.3-201ENST00000514280 936 ntBASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AP001582.1-201ENST00000525856 295 ntBASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AP001258.2-201ENST00000529891 490 ntBASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 RNF216P1-203ENST00000404404 2427 ntBASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 Z93015.1-201ENST00000451718 390 ntBASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AC025279.2-201ENST00000569730 653 ntBASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD4Q5XG99 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 AC107373.2-201ENST00000607735 490 ntBASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 AC138951.2-201ENST00000623455 1161 ntBASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD4Q5XG99 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms