Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 KRT18P56-201ENST00000507275 550 ntBASIC15.5■□□□□ 0.07
RNF220Q5VTB9 AC073648.2-201ENST00000510116 352 ntBASIC15.5■□□□□ 0.07
RNF220Q5VTB9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 MPDU1-223ENST00000582151 728 ntBASIC15.5■□□□□ 0.07
RNF220Q5VTB9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF220Q5VTB9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 COL6A4P2-202ENST00000504443 2753 ntBASIC15.49■□□□□ 0.07
RNF220Q5VTB9 TMBIM7P-203ENST00000641617 1718 ntBASIC15.49■□□□□ 0.07
RNF220Q5VTB9 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 RPS15P9-201ENST00000494093 319 ntBASIC15.49■□□□□ 0.07
RNF220Q5VTB9 SLC25A6P2-201ENST00000497974 877 ntBASIC15.49■□□□□ 0.07
RNF220Q5VTB9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 MIR4492-201ENST00000581627 80 ntBASIC15.49■□□□□ 0.07
RNF220Q5VTB9 GGTLC5P-201ENST00000617623 998 ntBASIC15.49■□□□□ 0.07
RNF220Q5VTB9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF220Q5VTB9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 AL161772.1-201ENST00000610494 4412 ntBASIC15.48■□□□□ 0.07
RNF220Q5VTB9 AC020658.6-201ENST00000623564 1870 ntBASIC15.48■□□□□ 0.07
RNF220Q5VTB9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 AC073621.1-201ENST00000392730 636 ntBASIC15.48■□□□□ 0.07
RNF220Q5VTB9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 AC136632.2-201ENST00000512891 861 ntBASIC15.48■□□□□ 0.07
RNF220Q5VTB9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 OR7E14P-202ENST00000530490 1290 ntBASIC15.48■□□□□ 0.07
RNF220Q5VTB9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.48■□□□□ 0.07
RNF220Q5VTB9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF220Q5VTB9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms