Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.81■□□□□ 0.76
RC3H1Q5TC82 PRSS30P-206ENST00000641773 873 ntBASIC19.81■□□□□ 0.76
RC3H1Q5TC82 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 AC011477.6-201ENST00000604980 1927 ntBASIC19.8■□□□□ 0.76
RC3H1Q5TC82 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 HSPB1P2-201ENST00000448722 546 ntBASIC19.8■□□□□ 0.76
RC3H1Q5TC82 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.8■□□□□ 0.76
RC3H1Q5TC82 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 NUS1P3-201ENST00000423502 862 ntBASIC19.79■□□□□ 0.76
RC3H1Q5TC82 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 AC126915.1-201ENST00000522847 1038 ntBASIC19.79■□□□□ 0.76
RC3H1Q5TC82 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.79■□□□□ 0.76
RC3H1Q5TC82 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 RNU1-114P-201ENST00000365297 166 ntBASIC19.78■□□□□ 0.76
RC3H1Q5TC82 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 MIR648-201ENST00000385046 94 ntBASIC19.78■□□□□ 0.76
RC3H1Q5TC82 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 ECM1P1-201ENST00000604092 1279 ntBASIC19.78■□□□□ 0.76
RC3H1Q5TC82 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms