Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 HAUS4P1-201ENST00000406739 1145 ntBASIC16.33■□□□□ 0.2
GABPB1Q06547 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.33■□□□□ 0.2
GABPB1Q06547 AC097658.1-201ENST00000475555 843 ntBASIC16.33■□□□□ 0.2
GABPB1Q06547 AP003041.3-201ENST00000527151 707 ntBASIC16.33■□□□□ 0.2
GABPB1Q06547 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.33■□□□□ 0.2
GABPB1Q06547 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 SLC25A1P4-201ENST00000567977 778 ntBASIC16.33■□□□□ 0.2
GABPB1Q06547 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.33■□□□□ 0.2
GABPB1Q06547 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
GABPB1Q06547 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
GABPB1Q06547 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.33■□□□□ 0.2
GABPB1Q06547 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.33■□□□□ 0.2
GABPB1Q06547 AC005622.1-201ENST00000636801 1703 ntBASIC16.33■□□□□ 0.2
GABPB1Q06547 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
GABPB1Q06547 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.33■□□□□ 0.2
GABPB1Q06547 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABPB1Q06547 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.33■□□□□ 0.2
GABPB1Q06547 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.33■□□□□ 0.2
GABPB1Q06547 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.33■□□□□ 0.2
GABPB1Q06547 AC004241.5-201ENST00000623870 2448 ntBASIC16.33■□□□□ 0.2
GABPB1Q06547 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
GABPB1Q06547 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GABPB1Q06547 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
GABPB1Q06547 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
GABPB1Q06547 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.32■□□□□ 0.2
GABPB1Q06547 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 HLA-F-220ENST00000434407 884 ntBASIC16.32■□□□□ 0.2
GABPB1Q06547 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.32■□□□□ 0.2
GABPB1Q06547 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.32■□□□□ 0.2
GABPB1Q06547 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.32■□□□□ 0.2
GABPB1Q06547 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABPB1Q06547 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.32■□□□□ 0.2
GABPB1Q06547 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GABPB1Q06547 AC023090.2-201ENST00000625182 2110 ntBASIC16.31■□□□□ 0.2
GABPB1Q06547 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GABPB1Q06547 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.31■□□□□ 0.2
GABPB1Q06547 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 BNIP3P1-202ENST00000550043 1585 ntBASIC16.31■□□□□ 0.2
GABPB1Q06547 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC16.31■□□□□ 0.2
GABPB1Q06547 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GABPB1Q06547 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.31■□□□□ 0.2
GABPB1Q06547 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.31■□□□□ 0.2
GABPB1Q06547 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABPB1Q06547 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.31■□□□□ 0.2
GABPB1Q06547 AC103564.2-201ENST00000432853 1299 ntBASIC16.31■□□□□ 0.2
GABPB1Q06547 CDCA4P2-201ENST00000441182 718 ntBASIC16.31■□□□□ 0.2
GABPB1Q06547 AC026185.1-201ENST00000445748 174 ntBASIC16.31■□□□□ 0.2
GABPB1Q06547 AC122714.2-201ENST00000502787 707 ntBASIC16.31■□□□□ 0.2
GABPB1Q06547 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.31■□□□□ 0.2
GABPB1Q06547 AC090192.1-201ENST00000517740 490 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms