Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS4XP62701 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RPS4XP62701 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS4XP62701 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 AL596257.1-201ENST00000641463 2694 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 BNIP3P1-202ENST00000550043 1585 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RPS4XP62701 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 SPCS2P4-201ENST00000436160 681 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.44□□□□□ -0.1
RPS4XP62701 KRT8P48-201ENST00000515599 1220 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 LINC01225-203ENST00000563550 1244 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 AP000842.3-202ENST00000569238 1080 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 AC015911.4-201ENST00000588022 1070 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.44□□□□□ -0.1
RPS4XP62701 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.44□□□□□ -0.1
RPS4XP62701 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RPS4XP62701 AC084121.4-201ENST00000641598 221 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 AF228730.8-201ENST00000642140 221 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 AC136621.1-201ENST00000624017 2304 ntBASIC14.44□□□□□ -0.1
RPS4XP62701 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS4XP62701 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPS4XP62701 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RPS4XP62701 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 AC105250.1-201ENST00000509378 2057 ntBASIC14.43□□□□□ -0.1
RPS4XP62701 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.43□□□□□ -0.1
RPS4XP62701 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RPS4XP62701 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.43□□□□□ -0.1
RPS4XP62701 AC004987.2-201ENST00000395959 1148 ntBASIC14.43□□□□□ -0.1
RPS4XP62701 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RPS4XP62701 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.43□□□□□ -0.1
RPS4XP62701 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 AC079140.1-201ENST00000508039 487 ntBASIC14.43□□□□□ -0.1
RPS4XP62701 RNA5SP421-201ENST00000516864 134 ntBASIC14.43□□□□□ -0.1
RPS4XP62701 KRT8P23-201ENST00000560090 1207 ntBASIC14.43□□□□□ -0.1
RPS4XP62701 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.43□□□□□ -0.1
RPS4XP62701 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms