Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC25A1P53007 RN7SL589P-201ENST00000481268 310 ntBASIC14.22□□□□□ -0.13
SLC25A1P53007 RNA5SP410-201ENST00000516285 106 ntBASIC14.22□□□□□ -0.13
SLC25A1P53007 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC25A1P53007 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.22□□□□□ -0.13
SLC25A1P53007 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC25A1P53007 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SLC25A1P53007 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC25A1P53007 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 AC027601.4-201ENST00000611259 610 ntBASIC14.22□□□□□ -0.13
SLC25A1P53007 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC25A1P53007 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC25A1P53007 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SLC25A1P53007 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SLC25A1P53007 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC25A1P53007 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC25A1P53007 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SLC25A1P53007 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC25A1P53007 AC018892.3-201ENST00000623986 2499 ntBASIC14.21□□□□□ -0.13
SLC25A1P53007 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC25A1P53007 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC25A1P53007 EEF1DP4-201ENST00000446006 880 ntBASIC14.21□□□□□ -0.13
SLC25A1P53007 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.21□□□□□ -0.13
SLC25A1P53007 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SLC25A1P53007 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 FAM197Y3-203ENST00000618346 717 ntBASIC14.21□□□□□ -0.13
SLC25A1P53007 AC091812.2-201ENST00000619081 385 ntBASIC14.21□□□□□ -0.13
SLC25A1P53007 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC25A1P53007 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
SLC25A1P53007 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC25A1P53007 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC25A1P53007 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC25A1P53007 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC25A1P53007 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SLC25A1P53007 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC25A1P53007 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.21□□□□□ -0.14
SLC25A1P53007 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC25A1P53007 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 AC023824.1-201ENST00000562945 2975 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 MIR346-201ENST00000362234 95 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC25A1P53007 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 HLA-H-201ENST00000383620 1096 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC25A1P53007 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms