Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ACKR1-201ENST00000368121 1240 ntBASIC19.53■□□□□ 0.72
NUP98P52948 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.53■□□□□ 0.72
NUP98P52948 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.53■□□□□ 0.72
NUP98P52948 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.53■□□□□ 0.72
NUP98P52948 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NUP98P52948 AC148477.4-201ENST00000613430 1793 ntBASIC19.53■□□□□ 0.72
NUP98P52948 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.53■□□□□ 0.72
NUP98P52948 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP98P52948 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.53■□□□□ 0.72
NUP98P52948 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.52■□□□□ 0.72
NUP98P52948 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.52■□□□□ 0.72
NUP98P52948 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.52■□□□□ 0.72
NUP98P52948 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.52■□□□□ 0.72
NUP98P52948 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.52■□□□□ 0.72
NUP98P52948 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.52■□□□□ 0.72
NUP98P52948 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.52■□□□□ 0.72
NUP98P52948 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.52■□□□□ 0.72
NUP98P52948 AL118558.3-201ENST00000607414 1079 ntBASIC19.52■□□□□ 0.72
NUP98P52948 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
NUP98P52948 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUP98P52948 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NUP98P52948 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NUP98P52948 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.52■□□□□ 0.71
NUP98P52948 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NUP98P52948 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NUP98P52948 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
NUP98P52948 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.52■□□□□ 0.71
NUP98P52948 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.52■□□□□ 0.71
NUP98P52948 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.51■□□□□ 0.71
NUP98P52948 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.51■□□□□ 0.71
NUP98P52948 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.51■□□□□ 0.71
NUP98P52948 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NUP98P52948 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 ECM1P1-201ENST00000604092 1279 ntBASIC19.51■□□□□ 0.71
NUP98P52948 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NUP98P52948 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.51■□□□□ 0.71
NUP98P52948 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NUP98P52948 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.51■□□□□ 0.71
NUP98P52948 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.51■□□□□ 0.71
NUP98P52948 EIF3FP3-201ENST00000434851 1086 ntBASIC19.51■□□□□ 0.71
NUP98P52948 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NUP98P52948 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP98P52948 PCDHA14-201ENST00000506751 2298 ntBASIC19.5■□□□□ 0.71
NUP98P52948 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 KRT8P35-201ENST00000483942 1338 ntBASIC19.5■□□□□ 0.71
NUP98P52948 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.5■□□□□ 0.71
NUP98P52948 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NUP98P52948 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NUP98P52948 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 AC112504.1-201ENST00000623415 1841 ntBASIC19.5■□□□□ 0.71
NUP98P52948 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.5■□□□□ 0.71
NUP98P52948 AC006001.1-201ENST00000325130 474 ntBASIC19.5■□□□□ 0.71
NUP98P52948 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NUP98P52948 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NUP98P52948 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.5■□□□□ 0.71
NUP98P52948 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.5■□□□□ 0.71
NUP98P52948 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.5■□□□□ 0.71
NUP98P52948 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.5■□□□□ 0.71
NUP98P52948 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.5■□□□□ 0.71
NUP98P52948 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.5■□□□□ 0.71
NUP98P52948 AC024909.3-201ENST00000611513 2257 ntBASIC19.5■□□□□ 0.71
NUP98P52948 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.5■□□□□ 0.71
NUP98P52948 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP98P52948 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.49■□□□□ 0.71
NUP98P52948 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 KLF2P2-201ENST00000416807 1039 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms