Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 AC011270.2-201ENST00000624293 2550 ntBASIC17.61■□□□□ 0.41
GPC3P51654 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.61■□□□□ 0.41
GPC3P51654 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.61■□□□□ 0.41
GPC3P51654 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.61■□□□□ 0.41
GPC3P51654 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.61■□□□□ 0.41
GPC3P51654 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.61■□□□□ 0.41
GPC3P51654 AC055876.2-201ENST00000531834 546 ntBASIC17.61■□□□□ 0.41
GPC3P51654 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.61■□□□□ 0.41
GPC3P51654 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.61■□□□□ 0.41
GPC3P51654 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
GPC3P51654 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 Z97205.2-201ENST00000564697 1639 ntBASIC17.61■□□□□ 0.41
GPC3P51654 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC3P51654 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC3P51654 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 AL603832.2-201ENST00000566195 2125 ntBASIC17.6■□□□□ 0.41
GPC3P51654 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.6■□□□□ 0.41
GPC3P51654 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC3P51654 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 DGCR5-201ENST00000399539 862 ntBASIC17.6■□□□□ 0.41
GPC3P51654 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
GPC3P51654 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
GPC3P51654 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.6■□□□□ 0.41
GPC3P51654 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
GPC3P51654 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
GPC3P51654 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.6■□□□□ 0.41
GPC3P51654 WASH4P-201ENST00000564273 1246 ntBASIC17.6■□□□□ 0.41
GPC3P51654 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.6■□□□□ 0.41
GPC3P51654 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GPC3P51654 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC3P51654 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.6■□□□□ 0.41
GPC3P51654 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC3P51654 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.59■□□□□ 0.41
GPC3P51654 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.59■□□□□ 0.41
GPC3P51654 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.59■□□□□ 0.41
GPC3P51654 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 MIR648-201ENST00000385046 94 ntBASIC17.59■□□□□ 0.41
GPC3P51654 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.59■□□□□ 0.41
GPC3P51654 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.59■□□□□ 0.41
GPC3P51654 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.59■□□□□ 0.41
GPC3P51654 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.59■□□□□ 0.41
GPC3P51654 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
GPC3P51654 AC008494.3-201ENST00000606615 944 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms