Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK7P50613 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.58■□□□□ 0.4
CDK7P50613 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDK7P50613 MIR1247-201ENST00000408206 136 ntBASIC17.58■□□□□ 0.4
CDK7P50613 AC016694.1-201ENST00000434179 700 ntBASIC17.58■□□□□ 0.4
CDK7P50613 KRT18P64-201ENST00000434946 1219 ntBASIC17.58■□□□□ 0.4
CDK7P50613 GOLGA2P4-201ENST00000441462 777 ntBASIC17.58■□□□□ 0.4
CDK7P50613 AC012441.1-201ENST00000446669 685 ntBASIC17.58■□□□□ 0.4
CDK7P50613 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
CDK7P50613 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 RPL13AP25-201ENST00000484130 612 ntBASIC17.58■□□□□ 0.4
CDK7P50613 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK7P50613 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.58■□□□□ 0.4
CDK7P50613 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.58■□□□□ 0.4
CDK7P50613 AC079316.1-201ENST00000548397 411 ntBASIC17.58■□□□□ 0.4
CDK7P50613 AC120045.2-201ENST00000567334 178 ntBASIC17.58■□□□□ 0.4
CDK7P50613 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.58■□□□□ 0.4
CDK7P50613 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.58■□□□□ 0.4
CDK7P50613 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.58■□□□□ 0.4
CDK7P50613 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDK7P50613 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK7P50613 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDK7P50613 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDK7P50613 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK7P50613 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK7P50613 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CDK7P50613 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK7P50613 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 AC026954.1-201ENST00000429771 1293 ntBASIC17.57■□□□□ 0.4
CDK7P50613 YBX1P6-201ENST00000442962 1002 ntBASIC17.57■□□□□ 0.4
CDK7P50613 AC245100.5-201ENST00000452108 331 ntBASIC17.57■□□□□ 0.4
CDK7P50613 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.57■□□□□ 0.4
CDK7P50613 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.57■□□□□ 0.4
CDK7P50613 DUX4L45-201ENST00000566406 1057 ntBASIC17.57■□□□□ 0.4
CDK7P50613 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 AC010328.2-201ENST00000597698 1111 ntBASIC17.57■□□□□ 0.4
CDK7P50613 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK7P50613 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK7P50613 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK7P50613 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDK7P50613 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK7P50613 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK7P50613 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK7P50613 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDK7P50613 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK7P50613 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK7P50613 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms