Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
HNF4AP41235 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 KRT18P32-201ENST00000424695 1287 ntBASIC15.57■□□□□ 0.08
HNF4AP41235 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.57■□□□□ 0.08
HNF4AP41235 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.57■□□□□ 0.08
HNF4AP41235 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
HNF4AP41235 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HNF4AP41235 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HNF4AP41235 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.56■□□□□ 0.08
HNF4AP41235 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
HNF4AP41235 AC023824.1-201ENST00000562945 2975 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.56■□□□□ 0.08
HNF4AP41235 FAM58DP-201ENST00000428076 619 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.56■□□□□ 0.08
HNF4AP41235 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.56■□□□□ 0.08
HNF4AP41235 AP000344.2-201ENST00000512987 629 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 RNA5SP410-201ENST00000516285 106 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 AC243562.2-201ENST00000561247 970 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 AC093520.2-201ENST00000561830 333 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
HNF4AP41235 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.56■□□□□ 0.08
HNF4AP41235 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.56■□□□□ 0.08
HNF4AP41235 AC139530.3-201ENST00000620344 690 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.56■□□□□ 0.08
HNF4AP41235 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HNF4AP41235 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.56■□□□□ 0.08
HNF4AP41235 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.56■□□□□ 0.08
HNF4AP41235 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.56■□□□□ 0.08
HNF4AP41235 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
HNF4AP41235 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.56■□□□□ 0.08
HNF4AP41235 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.56■□□□□ 0.08
HNF4AP41235 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HNF4AP41235 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HNF4AP41235 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HNF4AP41235 AL136379.1-201ENST00000623471 2642 ntBASIC15.56■□□□□ 0.08
HNF4AP41235 PAUPAR-201ENST00000630360 2965 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms