Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.23■□□□□ 0.19
HADHAP40939 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HADHAP40939 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 AC005237.2-201ENST00000434368 219 ntBASIC16.23■□□□□ 0.19
HADHAP40939 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.23■□□□□ 0.19
HADHAP40939 AC004835.2-201ENST00000603762 682 ntBASIC16.23■□□□□ 0.19
HADHAP40939 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.23■□□□□ 0.19
HADHAP40939 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.23■□□□□ 0.19
HADHAP40939 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.23■□□□□ 0.19
HADHAP40939 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.23■□□□□ 0.19
HADHAP40939 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.23■□□□□ 0.19
HADHAP40939 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.23■□□□□ 0.19
HADHAP40939 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
HADHAP40939 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HADHAP40939 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HADHAP40939 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HADHAP40939 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HADHAP40939 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.22■□□□□ 0.19
HADHAP40939 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
HADHAP40939 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.22■□□□□ 0.19
HADHAP40939 AC011477.6-201ENST00000604980 1927 ntBASIC16.22■□□□□ 0.19
HADHAP40939 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.22■□□□□ 0.19
HADHAP40939 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 AC004461.1-201ENST00000412461 403 ntBASIC16.22■□□□□ 0.19
HADHAP40939 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHAP40939 AC004967.1-201ENST00000453589 447 ntBASIC16.22■□□□□ 0.19
HADHAP40939 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 RNA5SP410-201ENST00000516285 106 ntBASIC16.22■□□□□ 0.19
HADHAP40939 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHAP40939 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
HADHAP40939 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 AC061975.2-201ENST00000581722 295 ntBASIC16.22■□□□□ 0.19
HADHAP40939 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHAP40939 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.22■□□□□ 0.19
HADHAP40939 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HADHAP40939 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HADHAP40939 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHAP40939 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.21■□□□□ 0.19
HADHAP40939 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.21■□□□□ 0.19
HADHAP40939 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HADHAP40939 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HADHAP40939 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.21■□□□□ 0.19
HADHAP40939 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HADHAP40939 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 AC254562.1-201ENST00000417586 456 ntBASIC16.21■□□□□ 0.19
HADHAP40939 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.21■□□□□ 0.19
HADHAP40939 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHAP40939 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.21■□□□□ 0.19
HADHAP40939 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.21■□□□□ 0.19
HADHAP40939 SLC25A39P2-201ENST00000537614 270 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms