Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 NME2P1-201ENST00000426182 414 ntBASIC15.69■□□□□ 0.1
TRIM23P36406 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM23P36406 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM23P36406 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM23P36406 GAPDHP21-201ENST00000450301 1010 ntBASIC15.69■□□□□ 0.1
TRIM23P36406 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM23P36406 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM23P36406 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM23P36406 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM23P36406 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM23P36406 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM23P36406 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRIM23P36406 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM23P36406 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM23P36406 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM23P36406 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM23P36406 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 CROCCP1-201ENST00000426910 5675 ntBASIC15.69■□□□□ 0.1
TRIM23P36406 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM23P36406 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM23P36406 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM23P36406 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM23P36406 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 AL596257.1-201ENST00000641463 2694 ntBASIC15.69■□□□□ 0.1
TRIM23P36406 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM23P36406 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM23P36406 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.68■□□□□ 0.1
TRIM23P36406 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 DOC2GP-204ENST00000639052 2548 ntBASIC15.68■□□□□ 0.1
TRIM23P36406 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 DGCR5-201ENST00000399539 862 ntBASIC15.68■□□□□ 0.1
TRIM23P36406 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM23P36406 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM23P36406 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 RN7SL692P-201ENST00000464677 288 ntBASIC15.68■□□□□ 0.1
TRIM23P36406 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM23P36406 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM23P36406 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM23P36406 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM23P36406 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 AC079328.2-201ENST00000561241 3354 ntBASIC15.68■□□□□ 0.1
TRIM23P36406 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRIM23P36406 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 AC069224.1-201ENST00000566372 1715 ntBASIC15.68■□□□□ 0.1
TRIM23P36406 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM23P36406 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM23P36406 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRIM23P36406 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM23P36406 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM23P36406 CYP2T1P-202ENST00000641596 2535 ntBASIC15.67■□□□□ 0.1
TRIM23P36406 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM23P36406 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM23P36406 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM23P36406 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM23P36406 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms