Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 AL080243.2-201ENST00000418783 582 ntBASIC15.2■□□□□ 0.02
MMP11P24347 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.2■□□□□ 0.02
MMP11P24347 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 AL844908.2-201ENST00000609461 460 ntBASIC15.2■□□□□ 0.02
MMP11P24347 AF228730.6-201ENST00000641497 218 ntBASIC15.2■□□□□ 0.02
MMP11P24347 AC084121.3-201ENST00000641716 218 ntBASIC15.2■□□□□ 0.02
MMP11P24347 AC105233.6-201ENST00000642093 218 ntBASIC15.2■□□□□ 0.02
MMP11P24347 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP11P24347 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP11P24347 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP11P24347 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MMP11P24347 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 REXO1L8P-201ENST00000604378 1897 ntBASIC15.19■□□□□ 0.02
MMP11P24347 U82695.1-201ENST00000635752 1889 ntBASIC15.19■□□□□ 0.02
MMP11P24347 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.19■□□□□ 0.02
MMP11P24347 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 AC009407.1-201ENST00000568958 598 ntBASIC15.19■□□□□ 0.02
MMP11P24347 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP11P24347 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP11P24347 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP11P24347 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.19■□□□□ 0.02
MMP11P24347 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP11P24347 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MMP11P24347 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MMP11P24347 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.18■□□□□ 0.02
MMP11P24347 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MMP11P24347 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP11P24347 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MMP11P24347 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MMP11P24347 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MMP11P24347 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP11P24347 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms