Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM1P09493 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM1P09493 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM1P09493 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TPM1P09493 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TPM1P09493 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TPM1P09493 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TPM1P09493 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.69■□□□□ 0.42
TPM1P09493 TSPY19P-201ENST00000418461 509 ntBASIC17.69■□□□□ 0.42
TPM1P09493 TSPY18P-201ENST00000441642 509 ntBASIC17.69■□□□□ 0.42
TPM1P09493 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM1P09493 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.69■□□□□ 0.42
TPM1P09493 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.69■□□□□ 0.42
TPM1P09493 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TPM1P09493 PRELID1P1-202ENST00000567272 903 ntBASIC17.69■□□□□ 0.42
TPM1P09493 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.69■□□□□ 0.42
TPM1P09493 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM1P09493 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 AL109954.1-202ENST00000564051 2148 ntBASIC17.69■□□□□ 0.42
TPM1P09493 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TPM1P09493 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TPM1P09493 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM1P09493 CICP13-201ENST00000422015 2789 ntBASIC17.68■□□□□ 0.42
TPM1P09493 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM1P09493 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TPM1P09493 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TPM1P09493 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM1P09493 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM1P09493 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM1P09493 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 GRK6P1-201ENST00000400595 1711 ntBASIC17.68■□□□□ 0.42
TPM1P09493 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 RPS2P1-201ENST00000434010 821 ntBASIC17.68■□□□□ 0.42
TPM1P09493 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM1P09493 AP002469.2-201ENST00000531724 424 ntBASIC17.68■□□□□ 0.42
TPM1P09493 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM1P09493 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM1P09493 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM1P09493 AL645728.2-201ENST00000641974 660 ntBASIC17.68■□□□□ 0.42
TPM1P09493 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM1P09493 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TPM1P09493 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM1P09493 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TPM1P09493 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM1P09493 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TPM1P09493 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM1P09493 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM1P09493 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM1P09493 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.67■□□□□ 0.42
TPM1P09493 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM1P09493 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM1P09493 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM1P09493 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM1P09493 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM1P09493 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms