Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RETP07949 HLA-A-202ENST00000376806 1854 ntBASIC16.12■□□□□ 0.17
RETP07949 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.12■□□□□ 0.17
RETP07949 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.11■□□□□ 0.17
RETP07949 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.11■□□□□ 0.17
RETP07949 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 CDC14C-201ENST00000428251 1719 ntBASIC16.11■□□□□ 0.17
RETP07949 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RETP07949 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RETP07949 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.11■□□□□ 0.17
RETP07949 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.11■□□□□ 0.17
RETP07949 PFN1P12-201ENST00000455938 534 ntBASIC16.11■□□□□ 0.17
RETP07949 AC099548.2-209ENST00000480264 625 ntBASIC16.11■□□□□ 0.17
RETP07949 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.11■□□□□ 0.17
RETP07949 SLC25A47P1-201ENST00000531577 414 ntBASIC16.11■□□□□ 0.17
RETP07949 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RETP07949 RARRES2P5-201ENST00000564013 466 ntBASIC16.11■□□□□ 0.17
RETP07949 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.11■□□□□ 0.17
RETP07949 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RETP07949 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
RETP07949 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RETP07949 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.11■□□□□ 0.17
RETP07949 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RETP07949 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RETP07949 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RETP07949 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RETP07949 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RETP07949 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RETP07949 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RETP07949 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RETP07949 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.1■□□□□ 0.17
RETP07949 AC099336.1-201ENST00000417053 1171 ntBASIC16.1■□□□□ 0.17
RETP07949 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.1■□□□□ 0.17
RETP07949 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.1■□□□□ 0.17
RETP07949 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.1■□□□□ 0.17
RETP07949 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 AL139099.5-201ENST00000635274 300 ntBASIC16.1■□□□□ 0.17
RETP07949 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.1■□□□□ 0.17
RETP07949 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RETP07949 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RETP07949 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RETP07949 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.1■□□□□ 0.17
RETP07949 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.1■□□□□ 0.17
RETP07949 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms