Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 AC009053.2-201ENST00000563701 2365 ntBASIC16.76■□□□□ 0.27
RB1P06400 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.76■□□□□ 0.27
RB1P06400 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RB1P06400 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.76■□□□□ 0.27
RB1P06400 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 RN7SL190P-201ENST00000582519 257 ntBASIC16.76■□□□□ 0.27
RB1P06400 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.76■□□□□ 0.27
RB1P06400 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
RB1P06400 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.76■□□□□ 0.27
RB1P06400 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.76■□□□□ 0.27
RB1P06400 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RB1P06400 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RB1P06400 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RB1P06400 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RB1P06400 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 AHCYP2-201ENST00000430630 1300 ntBASIC16.75■□□□□ 0.27
RB1P06400 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.75■□□□□ 0.27
RB1P06400 REXO1L1P-202ENST00000608646 1974 ntBASIC16.75■□□□□ 0.27
RB1P06400 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
RB1P06400 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.75■□□□□ 0.27
RB1P06400 KRT18P25-201ENST00000508931 1278 ntBASIC16.75■□□□□ 0.27
RB1P06400 RNA5SP423-201ENST00000517127 109 ntBASIC16.75■□□□□ 0.27
RB1P06400 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RB1P06400 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.75■□□□□ 0.27
RB1P06400 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.75■□□□□ 0.27
RB1P06400 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.75■□□□□ 0.27
RB1P06400 AC015910.1-201ENST00000579400 975 ntBASIC16.75■□□□□ 0.27
RB1P06400 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.75■□□□□ 0.27
RB1P06400 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.75■□□□□ 0.27
RB1P06400 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.75■□□□□ 0.27
RB1P06400 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.75■□□□□ 0.27
RB1P06400 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.75■□□□□ 0.27
RB1P06400 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.75■□□□□ 0.27
RB1P06400 HLA-A-202ENST00000376806 1854 ntBASIC16.75■□□□□ 0.27
RB1P06400 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.75■□□□□ 0.27
RB1P06400 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.75■□□□□ 0.27
RB1P06400 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.75■□□□□ 0.27
RB1P06400 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.75■□□□□ 0.27
RB1P06400 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.75■□□□□ 0.27
RB1P06400 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RB1P06400 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RB1P06400 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RB1P06400 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.74■□□□□ 0.27
RB1P06400 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RB1P06400 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.74■□□□□ 0.27
RB1P06400 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RB1P06400 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.74■□□□□ 0.27
RB1P06400 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RB1P06400 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 AL591846.1-201ENST00000451736 433 ntBASIC16.74■□□□□ 0.27
RB1P06400 AKR7A2P1-201ENST00000460134 915 ntBASIC16.74■□□□□ 0.27
RB1P06400 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.74■□□□□ 0.27
RB1P06400 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RB1P06400 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.74■□□□□ 0.27
RB1P06400 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.74■□□□□ 0.27
RB1P06400 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.74■□□□□ 0.27
RB1P06400 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms