Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC20.59■□□□□ 0.89
COL5A2P05997 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.59■□□□□ 0.89
COL5A2P05997 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.59■□□□□ 0.89
COL5A2P05997 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.59■□□□□ 0.89
COL5A2P05997 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 RN7SL574P-201ENST00000581512 297 ntBASIC20.59■□□□□ 0.89
COL5A2P05997 PPY2P-201ENST00000582808 702 ntBASIC20.59■□□□□ 0.89
COL5A2P05997 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
COL5A2P05997 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.59■□□□□ 0.89
COL5A2P05997 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.59■□□□□ 0.89
COL5A2P05997 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.58■□□□□ 0.89
COL5A2P05997 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.58■□□□□ 0.89
COL5A2P05997 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COL5A2P05997 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC20.58■□□□□ 0.89
COL5A2P05997 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.58■□□□□ 0.89
COL5A2P05997 AC253536.4-201ENST00000440539 267 ntBASIC20.58■□□□□ 0.89
COL5A2P05997 AC114812.1-204ENST00000449669 728 ntBASIC20.58■□□□□ 0.89
COL5A2P05997 LDHBP1-201ENST00000455730 1119 ntBASIC20.58■□□□□ 0.89
COL5A2P05997 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.58■□□□□ 0.89
COL5A2P05997 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.58■□□□□ 0.89
COL5A2P05997 AC022217.1-201ENST00000521069 738 ntBASIC20.58■□□□□ 0.89
COL5A2P05997 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.58■□□□□ 0.89
COL5A2P05997 FGFR3P5-201ENST00000564496 886 ntBASIC20.58■□□□□ 0.89
COL5A2P05997 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.58■□□□□ 0.89
COL5A2P05997 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC20.58■□□□□ 0.89
COL5A2P05997 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COL5A2P05997 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.58■□□□□ 0.89
COL5A2P05997 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.58■□□□□ 0.89
COL5A2P05997 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.58■□□□□ 0.89
COL5A2P05997 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.58■□□□□ 0.89
COL5A2P05997 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COL5A2P05997 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
COL5A2P05997 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL5A2P05997 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.58■□□□□ 0.88
COL5A2P05997 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
COL5A2P05997 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL5A2P05997 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.58■□□□□ 0.88
COL5A2P05997 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL5A2P05997 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL5A2P05997 AC011477.6-201ENST00000604980 1927 ntBASIC20.58■□□□□ 0.88
COL5A2P05997 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 TPM3P8-201ENST00000330554 643 ntBASIC20.57■□□□□ 0.88
COL5A2P05997 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 MPV17-204ENST00000399052 749 ntTSL 4 BASIC20.57■□□□□ 0.88
COL5A2P05997 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.57■□□□□ 0.88
COL5A2P05997 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.57■□□□□ 0.88
COL5A2P05997 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
COL5A2P05997 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.57■□□□□ 0.88
COL5A2P05997 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.57■□□□□ 0.88
COL5A2P05997 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.57■□□□□ 0.88
COL5A2P05997 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.57■□□□□ 0.88
COL5A2P05997 AC244157.2-201ENST00000616239 1006 ntBASIC20.57■□□□□ 0.88
COL5A2P05997 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 AC006449.6-201ENST00000612330 2296 ntBASIC20.57■□□□□ 0.88
COL5A2P05997 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.57■□□□□ 0.88
COL5A2P05997 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.57■□□□□ 0.88
COL5A2P05997 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 AC106886.4-201ENST00000623557 2502 ntBASIC20.57■□□□□ 0.88
COL5A2P05997 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
COL5A2P05997 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.57■□□□□ 0.88
COL5A2P05997 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL5A2P05997 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.56■□□□□ 0.88
COL5A2P05997 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.56■□□□□ 0.88
COL5A2P05997 MIR4313-201ENST00000580760 101 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 RN7SL713P-201ENST00000582127 302 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms