Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.44■□□□□ 0.38
VTNP04004 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
VTNP04004 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.43■□□□□ 0.38
VTNP04004 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VTNP04004 PRORSD1P-202ENST00000563365 2154 ntBASIC17.43■□□□□ 0.38
VTNP04004 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.43■□□□□ 0.38
VTNP04004 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
VTNP04004 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.43■□□□□ 0.38
VTNP04004 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.43■□□□□ 0.38
VTNP04004 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VTNP04004 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VTNP04004 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VTNP04004 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.43■□□□□ 0.38
VTNP04004 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTNP04004 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.43■□□□□ 0.38
VTNP04004 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.42■□□□□ 0.38
VTNP04004 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.42■□□□□ 0.38
VTNP04004 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.42■□□□□ 0.38
VTNP04004 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 AC018695.7-201ENST00000624587 2492 ntBASIC17.42■□□□□ 0.38
VTNP04004 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
VTNP04004 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 AC079776.1-201ENST00000401540 1152 ntBASIC17.42■□□□□ 0.38
VTNP04004 TOMM22P5-201ENST00000416399 439 ntBASIC17.42■□□□□ 0.38
VTNP04004 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.42■□□□□ 0.38
VTNP04004 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.42■□□□□ 0.38
VTNP04004 FAM86LP-201ENST00000478302 853 ntBASIC17.42■□□□□ 0.38
VTNP04004 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.42■□□□□ 0.38
VTNP04004 IGHV3-71-201ENST00000523324 359 ntBASIC17.42■□□□□ 0.38
VTNP04004 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.42■□□□□ 0.38
VTNP04004 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.42■□□□□ 0.38
VTNP04004 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.42■□□□□ 0.38
VTNP04004 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.42■□□□□ 0.38
VTNP04004 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.42■□□□□ 0.38
VTNP04004 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VTNP04004 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.42■□□□□ 0.38
VTNP04004 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VTNP04004 CROCCP1-201ENST00000426910 5675 ntBASIC17.42■□□□□ 0.38
VTNP04004 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VTNP04004 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
VTNP04004 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
VTNP04004 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VTNP04004 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.42■□□□□ 0.38
VTNP04004 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms