Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
MT-ND3P03897 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.38■□□□□ 0.21
MT-ND3P03897 AC096734.2-201ENST00000562054 433 ntBASIC16.38■□□□□ 0.21
MT-ND3P03897 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-ND3P03897 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND3P03897 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-ND3P03897 AC007064.4-201ENST00000637740 555 ntBASIC16.38■□□□□ 0.21
MT-ND3P03897 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-ND3P03897 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND3P03897 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND3P03897 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.38■□□□□ 0.21
MT-ND3P03897 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MT-ND3P03897 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
MT-ND3P03897 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND3P03897 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 PCDHA3-202ENST00000532566 4594 ntBASIC16.37■□□□□ 0.21
MT-ND3P03897 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND3P03897 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND3P03897 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-ND3P03897 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND3P03897 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND3P03897 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-ND3P03897 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-ND3P03897 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
MT-ND3P03897 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
MT-ND3P03897 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.37■□□□□ 0.21
MT-ND3P03897 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 AC008677.1-201ENST00000519230 1561 ntBASIC16.37■□□□□ 0.21
MT-ND3P03897 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND3P03897 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND3P03897 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MT-ND3P03897 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND3P03897 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND3P03897 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-ND3P03897 AC012569.1-201ENST00000591191 1524 ntBASIC16.36■□□□□ 0.21
MT-ND3P03897 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.36■□□□□ 0.21
MT-ND3P03897 PMS2P2-201ENST00000425039 1128 ntBASIC16.36■□□□□ 0.21
MT-ND3P03897 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 DNAJB3-202ENST00000449667 1266 ntBASIC16.36■□□□□ 0.21
MT-ND3P03897 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 YBX1P5-201ENST00000509441 847 ntBASIC16.36■□□□□ 0.21
MT-ND3P03897 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.36■□□□□ 0.21
MT-ND3P03897 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.36■□□□□ 0.21
MT-ND3P03897 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND3P03897 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.36■□□□□ 0.21
MT-ND3P03897 TMBIM7P-203ENST00000641617 1718 ntBASIC16.36■□□□□ 0.21
MT-ND3P03897 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-ND3P03897 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND3P03897 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms