Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
GPC4O75487 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.12■□□□□ 0.17
GPC4O75487 AL138918.1-201ENST00000568306 659 ntBASIC16.12■□□□□ 0.17
GPC4O75487 MIR3687-2-201ENST00000577708 61 ntBASIC16.12■□□□□ 0.17
GPC4O75487 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 AC010327.4-202ENST00000591484 748 ntBASIC16.12■□□□□ 0.17
GPC4O75487 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.12■□□□□ 0.17
GPC4O75487 MIR3687-1-201ENST00000614492 61 ntBASIC16.12■□□□□ 0.17
GPC4O75487 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.12■□□□□ 0.17
GPC4O75487 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GPC4O75487 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.12■□□□□ 0.17
GPC4O75487 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
GPC4O75487 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GPC4O75487 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
GPC4O75487 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GPC4O75487 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.11■□□□□ 0.17
GPC4O75487 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.11■□□□□ 0.17
GPC4O75487 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.11■□□□□ 0.17
GPC4O75487 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.11■□□□□ 0.17
GPC4O75487 CEND1P1-201ENST00000451006 455 ntBASIC16.11■□□□□ 0.17
GPC4O75487 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.11■□□□□ 0.17
GPC4O75487 KRT8P48-201ENST00000515599 1220 ntBASIC16.11■□□□□ 0.17
GPC4O75487 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.11■□□□□ 0.17
GPC4O75487 LINC01225-203ENST00000563550 1244 ntBASIC16.11■□□□□ 0.17
GPC4O75487 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.11■□□□□ 0.17
GPC4O75487 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.11■□□□□ 0.17
GPC4O75487 MIR4469-201ENST00000583919 79 ntBASIC16.11■□□□□ 0.17
GPC4O75487 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.11■□□□□ 0.17
GPC4O75487 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.11■□□□□ 0.17
GPC4O75487 AC008267.7-201ENST00000624570 1194 ntBASIC16.11■□□□□ 0.17
GPC4O75487 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.11■□□□□ 0.17
GPC4O75487 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GPC4O75487 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
GPC4O75487 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.11■□□□□ 0.17
GPC4O75487 OR2I1P-210ENST00000642037 4691 ntBASIC16.11■□□□□ 0.17
GPC4O75487 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 PRAL-201ENST00000624952 3286 ntBASIC16.11■□□□□ 0.17
GPC4O75487 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
GPC4O75487 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GPC4O75487 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 AC092384.3-202ENST00000564646 2873 ntBASIC16.1■□□□□ 0.17
GPC4O75487 REXO1L8P-201ENST00000604378 1897 ntBASIC16.1■□□□□ 0.17
GPC4O75487 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.1■□□□□ 0.17
GPC4O75487 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.1■□□□□ 0.17
GPC4O75487 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 SPDYE11-202ENST00000450699 704 ntBASIC16.1■□□□□ 0.17
GPC4O75487 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 PRYP6-201ENST00000514804 343 ntBASIC16.1■□□□□ 0.17
GPC4O75487 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 AC092865.5-201ENST00000545435 363 ntBASIC16.1■□□□□ 0.17
GPC4O75487 SPDYE9P-201ENST00000570642 692 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms