Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PDCD6O75340 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.54□□□□□ -0.24
PDCD6O75340 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PDCD6O75340 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
PDCD6O75340 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.54□□□□□ -0.24
PDCD6O75340 AC090616.6-203ENST00000579186 1945 ntBASIC13.54□□□□□ -0.24
PDCD6O75340 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.54□□□□□ -0.24
PDCD6O75340 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.54□□□□□ -0.24
PDCD6O75340 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.54□□□□□ -0.24
PDCD6O75340 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDCD6O75340 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
PDCD6O75340 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.54□□□□□ -0.24
PDCD6O75340 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PDCD6O75340 AP002414.2-201ENST00000591780 3365 ntBASIC13.54□□□□□ -0.24
PDCD6O75340 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.54□□□□□ -0.24
PDCD6O75340 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.54□□□□□ -0.24
PDCD6O75340 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PDCD6O75340 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
PDCD6O75340 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
PDCD6O75340 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 AC138035.3-201ENST00000622706 2791 ntBASIC13.53□□□□□ -0.24
PDCD6O75340 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.53□□□□□ -0.24
PDCD6O75340 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.53□□□□□ -0.24
PDCD6O75340 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
PDCD6O75340 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.53□□□□□ -0.24
PDCD6O75340 AC073389.1-201ENST00000595595 795 ntBASIC13.53□□□□□ -0.24
PDCD6O75340 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 MST1L-201ENST00000442552 2185 ntBASIC13.53□□□□□ -0.24
PDCD6O75340 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 AC104109.2-201ENST00000602919 1418 ntBASIC13.53□□□□□ -0.24
PDCD6O75340 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PDCD6O75340 AC092127.1-201ENST00000567093 3455 ntBASIC13.53□□□□□ -0.24
PDCD6O75340 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 TNRC18P2-201ENST00000417666 2714 ntBASIC13.53□□□□□ -0.24
PDCD6O75340 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.53□□□□□ -0.24
PDCD6O75340 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDCD6O75340 AL161772.1-201ENST00000610494 4412 ntBASIC13.53□□□□□ -0.24
PDCD6O75340 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.52□□□□□ -0.24
PDCD6O75340 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
PDCD6O75340 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.52□□□□□ -0.24
PDCD6O75340 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PDCD6O75340 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PDCD6O75340 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PDCD6O75340 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.52□□□□□ -0.24
PDCD6O75340 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PDCD6O75340 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PDCD6O75340 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.52□□□□□ -0.24
PDCD6O75340 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms