Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 AC074044.1-201ENST00000609673 707 ntBASIC16.17■□□□□ 0.18
PRAMEF11O60813 AC008738.7-201ENST00000609744 511 ntBASIC16.17■□□□□ 0.18
PRAMEF11O60813 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 AC007950.2-201ENST00000615045 2347 ntBASIC16.17■□□□□ 0.18
PRAMEF11O60813 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF11O60813 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF11O60813 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 BTBD7P1-201ENST00000447253 1453 ntBASIC16.16■□□□□ 0.18
PRAMEF11O60813 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC114501.2-201ENST00000439631 535 ntBASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF11O60813 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF11O60813 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 BCRP1-201ENST00000444246 691 ntBASIC16.15■□□□□ 0.18
PRAMEF11O60813 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 SPCS2P1-201ENST00000561636 679 ntBASIC16.15■□□□□ 0.18
PRAMEF11O60813 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 AP003680.1-201ENST00000598970 3660 ntBASIC16.15■□□□□ 0.18
PRAMEF11O60813 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 AL096865.1-201ENST00000606796 927 ntBASIC16.15■□□□□ 0.18
PRAMEF11O60813 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 AJ011932.1-201ENST00000621707 465 ntBASIC16.15■□□□□ 0.18
PRAMEF11O60813 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF11O60813 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF11O60813 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.14■□□□□ 0.18
PRAMEF11O60813 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms