Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 EEF1DP4-201ENST00000446006 880 ntBASIC15.31■□□□□ 0.04
GFRA3O60609 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.31■□□□□ 0.04
GFRA3O60609 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.31■□□□□ 0.04
GFRA3O60609 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC15.31■□□□□ 0.04
GFRA3O60609 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
GFRA3O60609 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.31■□□□□ 0.04
GFRA3O60609 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GFRA3O60609 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.31■□□□□ 0.04
GFRA3O60609 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GFRA3O60609 AC051619.9-201ENST00000623237 597 ntBASIC15.31■□□□□ 0.04
GFRA3O60609 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 AL390961.4-201ENST00000623958 2535 ntBASIC15.31■□□□□ 0.04
GFRA3O60609 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 AL627231.1-201ENST00000394467 1125 ntBASIC15.3■□□□□ 0.04
GFRA3O60609 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GFRA3O60609 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC15.3■□□□□ 0.04
GFRA3O60609 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GFRA3O60609 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GFRA3O60609 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.3■□□□□ 0.04
GFRA3O60609 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.3■□□□□ 0.04
GFRA3O60609 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.3■□□□□ 0.04
GFRA3O60609 AC007787.1-201ENST00000588095 1583 ntBASIC15.3■□□□□ 0.04
GFRA3O60609 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 AC010326.4-201ENST00000604665 891 ntBASIC15.3■□□□□ 0.04
GFRA3O60609 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC15.3■□□□□ 0.04
GFRA3O60609 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GFRA3O60609 AC022748.3-201ENST00000621828 275 ntBASIC15.3■□□□□ 0.04
GFRA3O60609 AL132780.4-201ENST00000624870 1135 ntBASIC15.3■□□□□ 0.04
GFRA3O60609 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.3■□□□□ 0.04
GFRA3O60609 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GFRA3O60609 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.3■□□□□ 0.04
GFRA3O60609 AC233280.19-201ENST00000633223 136 ntBASIC15.3■□□□□ 0.04
GFRA3O60609 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.3■□□□□ 0.04
GFRA3O60609 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GFRA3O60609 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GFRA3O60609 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GFRA3O60609 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.29■□□□□ 0.04
GFRA3O60609 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 TBC1D3J-201ENST00000620719 1426 ntBASIC15.29■□□□□ 0.04
GFRA3O60609 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GFRA3O60609 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GFRA3O60609 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.29■□□□□ 0.04
GFRA3O60609 KRT18P43-201ENST00000469825 1281 ntBASIC15.29■□□□□ 0.04
GFRA3O60609 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC15.29■□□□□ 0.04
GFRA3O60609 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 AC090857.1-201ENST00000527400 390 ntBASIC15.29■□□□□ 0.04
GFRA3O60609 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
GFRA3O60609 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.29■□□□□ 0.04
GFRA3O60609 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.29■□□□□ 0.04
GFRA3O60609 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms