Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.34□□□□□ -0.11
ZIC3O60481 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.34□□□□□ -0.11
ZIC3O60481 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 AL589987.1-201ENST00000453380 819 ntBASIC14.34□□□□□ -0.11
ZIC3O60481 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.34□□□□□ -0.11
ZIC3O60481 DOC2GP-202ENST00000514950 1163 ntBASIC14.34□□□□□ -0.11
ZIC3O60481 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.34□□□□□ -0.11
ZIC3O60481 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ZIC3O60481 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.34□□□□□ -0.11
ZIC3O60481 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.34□□□□□ -0.11
ZIC3O60481 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.34□□□□□ -0.11
ZIC3O60481 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
ZIC3O60481 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC3O60481 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC3O60481 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC3O60481 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC3O60481 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.33□□□□□ -0.12
ZIC3O60481 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC3O60481 SPDYE19P-201ENST00000338590 713 ntBASIC14.33□□□□□ -0.12
ZIC3O60481 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC3O60481 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.33□□□□□ -0.12
ZIC3O60481 TIMM17BP1-201ENST00000545713 516 ntBASIC14.33□□□□□ -0.12
ZIC3O60481 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ZIC3O60481 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC3O60481 AC004233.3-201ENST00000607794 1269 ntBASIC14.33□□□□□ -0.12
ZIC3O60481 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
ZIC3O60481 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ZIC3O60481 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ZIC3O60481 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ZIC3O60481 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZIC3O60481 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
ZIC3O60481 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC3O60481 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.32□□□□□ -0.12
ZIC3O60481 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.32□□□□□ -0.12
ZIC3O60481 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 PIN1P1-201ENST00000412108 996 ntBASIC14.32□□□□□ -0.12
ZIC3O60481 KRT18P64-201ENST00000434946 1219 ntBASIC14.32□□□□□ -0.12
ZIC3O60481 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.32□□□□□ -0.12
ZIC3O60481 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.32□□□□□ -0.12
ZIC3O60481 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms