Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
PDE6DO43924 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.46□□□□□ -0.42
PDE6DO43924 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.46□□□□□ -0.42
PDE6DO43924 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.46□□□□□ -0.42
PDE6DO43924 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.45□□□□□ -0.42
PDE6DO43924 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
PDE6DO43924 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
PDE6DO43924 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 SLC25A3P1-201ENST00000443844 931 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 ATP5G1P1-201ENST00000448724 379 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 PAWRP1-201ENST00000451083 565 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 AC245100.5-201ENST00000452108 331 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.45□□□□□ -0.42
PDE6DO43924 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.45□□□□□ -0.42
PDE6DO43924 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 AC073592.4-201ENST00000623827 446 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 AC005840.4-201ENST00000541242 2494 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.45□□□□□ -0.42
PDE6DO43924 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 SLC22A20-204ENST00000530038 1673 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDE6DO43924 INTS4P1-201ENST00000438455 1935 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.45□□□□□ -0.42
PDE6DO43924 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PDE6DO43924 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.44□□□□□ -0.42
PDE6DO43924 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms