Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.31■□□□□ 0.84
KCNQ3O43525 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.31■□□□□ 0.84
KCNQ3O43525 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNQ3O43525 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 AC234783.1-201ENST00000441761 496 ntBASIC20.31■□□□□ 0.84
KCNQ3O43525 AP001889.1-201ENST00000525414 633 ntBASIC20.31■□□□□ 0.84
KCNQ3O43525 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.31■□□□□ 0.84
KCNQ3O43525 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KCNQ3O43525 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KCNQ3O43525 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNQ3O43525 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNQ3O43525 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNQ3O43525 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KCNQ3O43525 MTHFR-217ENST00000641820 1569 ntBASIC20.3■□□□□ 0.84
KCNQ3O43525 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 C1QBPP1-201ENST00000400117 770 ntBASIC20.3■□□□□ 0.84
KCNQ3O43525 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNQ3O43525 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNQ3O43525 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNQ3O43525 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KCNQ3O43525 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KCNQ3O43525 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNQ3O43525 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KCNQ3O43525 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNQ3O43525 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNQ3O43525 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 KRT223P-202ENST00000449164 1292 ntBASIC20.29■□□□□ 0.84
KCNQ3O43525 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
KCNQ3O43525 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNQ3O43525 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNQ3O43525 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNQ3O43525 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.29■□□□□ 0.84
KCNQ3O43525 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNQ3O43525 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNQ3O43525 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNQ3O43525 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNQ3O43525 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNQ3O43525 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNQ3O43525 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNQ3O43525 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNQ3O43525 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
KCNQ3O43525 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
KCNQ3O43525 AC093433.1-201ENST00000458048 571 ntBASIC20.28■□□□□ 0.84
KCNQ3O43525 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNQ3O43525 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNQ3O43525 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KCNQ3O43525 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNQ3O43525 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNQ3O43525 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNQ3O43525 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNQ3O43525 MIR6799-201ENST00000620297 69 ntBASIC20.28■□□□□ 0.84
KCNQ3O43525 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNQ3O43525 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNQ3O43525 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms